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Transmission electron microscope

Microscope using a beam of electrons to form an image, giving the highest magnification and resolution and used to observe the ultrastructure of cells.

Scanning electron microscope

Electron microscope used to visualise the surfaces of cells and even whole organisms. The magnification and resolution are lower than a transmission electron microscope but the images are three dimensional (3D).


The structure of a cell as seen using an electron microscope.


How much bigger an image we see through a microscope is than the actual object, calculated using the formula magnification = image size/object size.


1000μm or 0.001m




The shortest distance between two points that allows the points to be seen as separate items.




The emission of heat, light or other electromagnetic waves.

Cells, microscopes and measuring

Cells were first discovered in the 17th century as microscopes were developed. Since then they have been recognised as the fundamental units of the structure, function and organisation of all living organisms. Much of our knowledge and understanding of cells springs from observations of cell structure and ultrastructure using different types of microscopes. Developing microscope technology has played an important role in providing evidence to support hypotheses regarding the roles of cells and their organelles in living organisms.

Light microscopes

Light or optical microscopes were developed in the 17th century and are still widely used globally. Light is directed through a sample of biological material and passes through an objective lens and an eyepiece lens to produce an inverted, greatly magnified image focused at the eye.

Light microscope Light microscope

The basic principles of a light microscope (Image on right courtesy of Brunel Mircoroscopes Ltd.)

Magnification and resolution

Microscopes magnify specimens making them appear bigger so we can see details that are invisible to the naked eye.

There are two factors which affect what we can see through any particular microscope: Magnification - how much bigger the image we see is than the actual object. This is calculated using a formula:
Magnification = image size/object size.

The magnification you use is a multiple of the magnification of the eye piece lens and the objective lens you select. For example:
Eyepiece lens x10, objective lens x10
Working magnification = 10 x 10 = x100

In a light microscope, magnification is limited by the wavelength of light and the resolving power of the microscope.

When you are working out the magnification, make sure all your measurements have the same units – don’t mix micrometres, nanometres and millimetres.

Remember :
1000 nanometres (nm) = 1 micrometre (µm)
1000µm = 1 millimetre (mm)
1000mm = 1 metre (m)

Resolution – the shortest distance between two points that allows the points to be seen as separate items. If they are closer together than this minimum distance, they merge and are seen as a single object. The smaller the limit of resolution, the greater the resolving power of the microscope.

The limit of resolution of the human eye is around 0.1mm. The print on a page is a mass of tiny dots but you see letters as complete lines because you cannot resolve the dots individually


The limits of resolution of the human eye mean that the scattering of dots on a piece of graph paper appear as clear grid lines.

To compare the magnification and resolving power of different types of microscopes see the animation at the end of this page.

Types of light microscopy

There are many types of light microscopy. They include:

  • Basic bright field illumination widely used in schools.
  • Binocular or stereo microscopes that have lower magnification than standard microscopes (often ranging from x5 to x40) but can be very useful for observing living specimens.
  • Laser scanning confocal microscopes are relatively new and expensive. They use a laser light to show up fluorescence from components pre-labelled with a fluorescent dye. The re-radiated light is passed through pin-holes, eliminating unwanted radiation and resulting in images with very high resolution.
trypanosoma lewisi

A light micrograph of a rat blood smear containing Trypanosoma lewisi parasites (CDC/Dr. Mae Melvin)

rat hepatoma

A light micrograph of cells of the rat hepatoma cell line H4IIE at 400x magnification (Shinryuu/CC01.0)

water flea

A laser scanning confocal micrograph of a water flea, Daphnia atkinsoni (Jan Michels/CC BY-NC-ND 3.0)

We use different types of light microscopes to provide us with different information about biological material.

Electron microscopes

Electron microscopes were developed in the mid 20th century and are widely used in universities and medicine and they have revolutionised our understanding of cells. The image in an electron microscope is formed as electrons are scattered by specially prepared biological material. The electrons behave rather like light waves but with a much smaller wavelength, giving much greater magnification and resolution of the images. The images are always formed on a screen or computer monitor.

Electron microscopes Electron microscopes

The basic principles of an electron microscope shown next to an electron microscope (Stahlkocher/ CC BY-SA 3.0)

The transmission electron microscope (TEM) gives the highest magnification and resolution and it is used to observe the internal ultrastructure of cells. The scanning electron microscope is used to visualise the surfaces of cells and even whole organisms. The magnification and resolution are lower but the images are three dimensional (3D) and can be spectacular.

cell of a mouse

Transmission electron microscope image of a mesothelial cell of a mouse (CDC/ Dr. Ed Ewing)

head louse nit on human hair

A scanning electron micrograph image of a head lice nit on a hair (CC0 1.0)

Transmission and scanning electron micrographs give us very different information about organisms.

More about microscopes