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Molecular activity

The rate of enzyme activity measured as the number of substrate molecules transformed per minute by a single enzyme molecule.

Turnover number

The rate of enzyme activity measured as the number of substrate molecules transformed per minute by a single enzyme molecule.

Covalent bonds

Formed when atoms share electrons to achieve a stable outer shell; a covalent bond is a shared pair of electrons.

Concentration

The amount of a substance (solute) in a solution

Liver

A large organ in the upper abdomen which manufactures, stores and breaks down substances as required by the body

Factors affecting enzyme action

Enzymes are only present in very small amounts in cells but this is all that is needed. Because each enzyme speeds up a reaction by many orders of magnitude, the activity of an enzyme is measured as the molecular activity, also known as the turnover number. This is the number of molecules of reactants (substrate) transformed per minute by a single enzyme molecule. For example catalase is an enzyme found in the liver and in potatoes. It catalyses the breakdown of hydrogen peroxide to oxygen and water.

2H2O2 → 2H2O + O2

The turnover number is 6x106min-1.

Enzymes are such efficient catalysts that they generally speed up reactions by a factor of 108 – 1026 over the uncatalysed rate of reaction. However the rates of enzyme controlled reactions are affected by a number of different factors. In most cases the effect of a factor on the rate of the reaction is due to its influence on the active site.

Substrate concentration

For a given amount of enzyme, an increase in substrate will result in an increase in the rate of reaction. The more substrate molecules there are, the faster the reaction takes place as more of the active sites are used. This continues until the concentration of substrate is so high that all the enzyme molecules are working at their maximum capacity. At this point, however much more substrate is added the reaction will not go any faster.

Substrate concentration effect graph

Graph to show effect of substrate concentration on rate of an enzyme controlled reaction with enzyme in excess

Temperature

In most chemical reactions an increase in temperature causes an increase in reaction rate. As the reactants are heated, the particles move faster and are more likely to collide with sufficient energy to overcome the activation energy of the substances reacting. We use the temperature coefficient Q10 to express the effect of temperature on the rate of a reaction. For almost all reactions, Q10 is two for every 10oC rise in temperature in the temperature range 0oC to 40oC. In other words, the reaction rate doubles for every 10oC rise in temperature.

In many reactions Q10 remains around two as the temperature continues to rise. But in most enzyme controlled reactions, once the temperature rises above 40oC the rate of reaction falls away rapidly and stops.

Effect of temperature on rate of enzyme controlled reaction

Graph to show effect of temperature on the rate of an enzyme controlled reaction

  • Initially the rise in temperature above the optimum temperature breaks some of the hydrogen bonds that hold the shape of the active site. This reduces the efficiency of the enzyme and the reaction rate falls.
  • If the temperature falls again the hydrogen bonds reform and the activity of the enzyme is restored.
  • If the temperature continues to rise the disulfide bonds and covalent bonds are broken. This permanently destroys the shape of the active site and so the catalytic activity of the enzyme is lost permanently. The rise in temperature permanently denatures the enzyme.

The effect of temperature on an enzyme controlled reaction

pH

The pH of the environment has a major effect on the rate of enzyme controlled reactions. The intermolecular bonds – particularly the hydrogen bonds – that maintain the tertiary structure and the active site are very vulnerable to changes in hydrogen ion concentration. Each enzyme has an optimum pH at which it works at its optimum rate. A change in pH causes a change in the shape of the active site. It is not so easy for the reactants to fit in and bind to the active site. The activity of the enzyme is reduced and the rate of reaction slows. If the change is too great, the substrate will not be able to bind to the active site at all and the enzyme can no longer catalyse the reaction. In most cases the activity of the enzyme is restored as the pH returns to its optimum level.

Effect of pH on rate of enzyme controlled reaction Effect of pH on rate of enzyme controlled reaction Effect of pH on rate of enzyme controlled reaction

Graph to show effect of pH on the rate of an enzyme controlled reaction

The effect of pH on an enzyme controlled reaction

Enzymes in extremophiles

Everything we know about the structure of enzymes tells us that they cannot work in extremes of temperature, in extremes of pH, or in any conditions such as very salty water that would affect the molecular structure of the protein and the shape of the active site.

However living organisms – and the enzymes that enable them to function – have been found in hot springs with water close to boiling point, deep within ice, in extreme salinity (such as some of the small ponds in places such as Death Valley in the USA) and in a wide range of environments with different pHs. Scientists are investigating these extremophile enzymes – not least as they may have many industrial applications (see Enzymes in industry). The proteins have evolved with very high numbers of hydrogen, disulphide and covalent bonds, giving them unusually stable structures that seem to be able to withstand the extremes where they live.

Hot springs Salty pools Ice

In hot springs, salty pools and ice, the enzymes of extremophiles continue to function.